CATlas

CATlas-Modeling Analysis

Select interested dataset

Input Mutation site

Submit Prediction Tasks

Download Your results

Usage Tips:

1. Follow the left workflow to start DL predicting.
2. Try [Demo 1] for in silico mutagenesis on one genomic region.
3. Try [Demo 2] for in silico mutagenesis on one genetic variant.
We will include all models upon publication.

Prediction with curated models

Instructions

Task Name

Select Dataset*

Species

Dataset

Select Cell types*

Genomic size/length for in silico mutagenesis*

Input Interested Region*

Chromosome

Start

End

OR multiple regions via .txt file in bed format, upload here:

Bed format: eg: chr5 75163200 75163948;
Seperated by '\t';line by "\n";

Input Genetic Variants*

Chromosome

Site

SNP

OR multiple SNPs via .txt file in VCF format, upload here:

Vcf format: eg: chr2 127135234 rs6733839 C T 100;
Seperated by '\t';line by "\n";

Email*