/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* Programmer: Robb Matzke * Thursday, April 16, 1998 */ #ifndef H5Zpublic_H #define H5Zpublic_H /* Public headers needed by this file */ #include "H5public.h" /** * \brief Filter identifiers * * \details Values 0 through 255 are for filters defined by the HDF5 library. * Values 256 through 511 are available for testing new filters. * Subsequent values should be obtained from the HDF5 development team * at mailto:help@hdfgroup.org. These values will never change because * they appear in the HDF5 files. */ typedef int H5Z_filter_t; /* Filter IDs */ /** * no filter */ #define H5Z_FILTER_ERROR (-1) /** * reserved indefinitely */ #define H5Z_FILTER_NONE 0 /** * deflation like gzip */ #define H5Z_FILTER_DEFLATE 1 /** * shuffle the data */ #define H5Z_FILTER_SHUFFLE 2 /** * fletcher32 checksum of EDC */ #define H5Z_FILTER_FLETCHER32 3 /** * szip compression */ #define H5Z_FILTER_SZIP 4 /** * nbit compression */ #define H5Z_FILTER_NBIT 5 /** * scale+offset compression */ #define H5Z_FILTER_SCALEOFFSET 6 /** * filter ids below this value are reserved for library use */ #define H5Z_FILTER_RESERVED 256 /** * maximum filter id */ #define H5Z_FILTER_MAX 65535 /* General macros */ /** * Symbol to remove all filters in H5Premove_filter() */ #define H5Z_FILTER_ALL 0 /** * Maximum number of filters allowed in a pipeline * * \internal (should probably be allowed to be an unlimited amount, but * currently each filter uses a bit in a 32-bit field, so the format * would have to be changed to accommodate that) */ #define H5Z_MAX_NFILTERS 32 /* Flags for filter definition (stored) */ /** * definition flag mask */ #define H5Z_FLAG_DEFMASK 0x00ff /** * filter is mandatory */ #define H5Z_FLAG_MANDATORY 0x0000 /** * filter is optional */ #define H5Z_FLAG_OPTIONAL 0x0001 /* Additional flags for filter invocation (not stored) */ /** * invocation flag mask */ #define H5Z_FLAG_INVMASK 0xff00 /** * reverse direction; read */ #define H5Z_FLAG_REVERSE 0x0100 /** * skip EDC filters for read */ #define H5Z_FLAG_SKIP_EDC 0x0200 /* Special parameters for szip compression */ /* [These are aliases for the similar definitions in szlib.h, which we can't * include directly due to the duplication of various symbols with the zlib.h * header file] */ /** * \ingroup SZIP */ #define H5_SZIP_ALLOW_K13_OPTION_MASK 1 /** * \ingroup SZIP */ #define H5_SZIP_CHIP_OPTION_MASK 2 /** * \ingroup SZIP */ #define H5_SZIP_EC_OPTION_MASK 4 /** * \ingroup SZIP */ #define H5_SZIP_NN_OPTION_MASK 32 /** * \ingroup SZIP */ #define H5_SZIP_MAX_PIXELS_PER_BLOCK 32 /* Macros for the shuffle filter */ /** * \ingroup SHUFFLE * Number of parameters that users can set for the shuffle filter */ #define H5Z_SHUFFLE_USER_NPARMS 0 /** * \ingroup SHUFFLE * Total number of parameters for the shuffle filter */ #define H5Z_SHUFFLE_TOTAL_NPARMS 1 /* Macros for the szip filter */ /** * \ingroup SZIP * Number of parameters that users can set for SZIP */ #define H5Z_SZIP_USER_NPARMS 2 /** * \ingroup SZIP * Total number of parameters for SZIP filter */ #define H5Z_SZIP_TOTAL_NPARMS 4 /** * \ingroup SZIP * "User" parameter for option mask */ #define H5Z_SZIP_PARM_MASK 0 /** * \ingroup SZIP * "User" parameter for pixels-per-block */ #define H5Z_SZIP_PARM_PPB 1 /** * \ingroup SZIP * "Local" parameter for bits-per-pixel */ #define H5Z_SZIP_PARM_BPP 2 /** * \ingroup SZIP * "Local" parameter for pixels-per-scanline */ #define H5Z_SZIP_PARM_PPS 3 /* Macros for the nbit filter */ /** * \ingroup NBIT * Number of parameters that users can set for the N-bit filter */ #define H5Z_NBIT_USER_NPARMS 0 /* Number of parameters that users can set */ /* Macros for the scale offset filter */ /** * \ingroup SCALEOFFSET * Number of parameters that users can set for the scale-offset filter */ #define H5Z_SCALEOFFSET_USER_NPARMS 2 /* Special parameters for ScaleOffset filter*/ /** * \ingroup SCALEOFFSET */ #define H5Z_SO_INT_MINBITS_DEFAULT 0 /** * \ingroup SCALEOFFSET */ typedef enum H5Z_SO_scale_type_t { H5Z_SO_FLOAT_DSCALE = 0, H5Z_SO_FLOAT_ESCALE = 1, H5Z_SO_INT = 2 } H5Z_SO_scale_type_t; /** * Current version of the H5Z_class_t struct */ #define H5Z_CLASS_T_VERS (1) /** * \ingroup FLETCHER32 * Values to decide if EDC is enabled for reading data */ typedef enum H5Z_EDC_t { H5Z_ERROR_EDC = -1, /**< error value */ H5Z_DISABLE_EDC = 0, H5Z_ENABLE_EDC = 1, H5Z_NO_EDC = 2 /**< sentinel */ } H5Z_EDC_t; /* Bit flags for H5Zget_filter_info */ #define H5Z_FILTER_CONFIG_ENCODE_ENABLED (0x0001) #define H5Z_FILTER_CONFIG_DECODE_ENABLED (0x0002) /** * Return values for filter callback function */ typedef enum H5Z_cb_return_t { H5Z_CB_ERROR = -1, /**< error value */ H5Z_CB_FAIL = 0, /**< I/O should fail if filter fails. */ H5Z_CB_CONT = 1, /**< I/O continues if filter fails. */ H5Z_CB_NO = 2 /**< sentinel */ } H5Z_cb_return_t; //! /** * Filter callback function definition */ typedef H5Z_cb_return_t (*H5Z_filter_func_t)(H5Z_filter_t filter, void *buf, size_t buf_size, void *op_data); //! /** * Structure for filter callback property */ typedef struct H5Z_cb_t { H5Z_filter_func_t func; void * op_data; } H5Z_cb_t; #ifdef __cplusplus extern "C" { #endif /** * \brief This callback determines if a filter can be applied to the dataset * with the characteristics provided * * \dcpl_id * \type_id * \space_id * * \return \htri_t * * \details Before a dataset gets created, the \ref H5Z_can_apply_func_t * callbacks for any filters used in the dataset creation property list * are called with the dataset's dataset creation property list, the * dataset's datatype and a dataspace describing a chunk (for chunked * dataset storage). * * The \ref H5Z_can_apply_func_t callback must determine if the * combination of the dataset creation property list setting, the * datatype and the dataspace represent a valid combination to apply * this filter to. For example, some cases of invalid combinations may * involve the filter not operating correctly on certain datatypes (or * certain datatype sizes), or certain sizes of the chunk dataspace. * * The \ref H5Z_can_apply_func_t callback can be the NULL pointer, in * which case, the library will assume that it can apply to any * combination of dataset creation property list values, datatypes and * dataspaces. * * The \ref H5Z_can_apply_func_t callback returns positive a valid * combination, zero for an invalid combination and negative for an * error. */ //! typedef htri_t (*H5Z_can_apply_func_t)(hid_t dcpl_id, hid_t type_id, hid_t space_id); //! /** * \brief The filter operation callback function, defining a filter's operation * on data * * \dcpl_id * \type_id * \space_id * * \return \herr_t * * \details After the \ref H5Z_can_apply_func_t callbacks are checked for new * datasets, the \ref H5Z_set_local_func_t callbacks for any filters * used in the dataset creation property list are called. These * callbacks receive the dataset's private copy of the dataset creation * property list passed in to H5Dcreate() (i.e. not the actual property * list passed in to H5Dcreate()) and the datatype ID passed in to * H5Dcreate() (which is not copied and should not be modified) and a * dataspace describing the chunk (for chunked dataset storage) (which * should also not be modified). * * The \ref H5Z_set_local_func_t callback must set any parameters that * are specific to this dataset, based on the combination of the * dataset creation property list values, the datatype and the * dataspace. For example, some filters perform different actions based * on different datatypes (or datatype sizes) or different number of * dimensions or dataspace sizes. * * The \ref H5Z_set_local_func_t callback can be the NULL pointer, in * which case, the library will assume that there are no * dataset-specific settings for this filter. * * The \ref H5Z_set_local_func_t callback must return non-negative on * success and negative for an error. */ //! typedef herr_t (*H5Z_set_local_func_t)(hid_t dcpl_id, hid_t type_id, hid_t space_id); //! /** * \brief The filter operation callback function, defining a filter's operation * on data * * \param[in] flags Bit vector specifying certain general properties of the filter * \param[in] cd_nelmts Number of elements in \p cd_values * \param[in] cd_values Auxiliary data for the filter * \param[in] nbytes The number of valid bytes in \p buf to be filtered * \param[in,out] buf_size The size of \p buf * \param[in,out] buf The filter buffer * * \return Returns the number of valid bytes of data contained in \p buf. In the * case of failure, the return value is 0 (zero) and all pointer * arguments are left unchanged. * * \details A filter gets definition flags and invocation flags (defined * above), the client data array and size defined when the filter was * added to the pipeline, the size in bytes of the data on which to * operate, and pointers to a buffer and its allocated size. * * The filter should store the result in the supplied buffer if * possible, otherwise it can allocate a new buffer, freeing the * original. The allocated size of the new buffer should be returned * through the \p buf_size pointer and the new buffer through the \p * buf pointer. * * The return value from the filter is the number of bytes in the * output buffer. If an error occurs then the function should return * zero and leave all pointer arguments unchanged. */ //! typedef size_t (*H5Z_func_t)(unsigned int flags, size_t cd_nelmts, const unsigned int cd_values[], size_t nbytes, size_t *buf_size, void **buf); //! /** * The filter table maps filter identification numbers to structs that * contain a pointers to the filter function and timing statistics. */ //! typedef struct H5Z_class2_t { int version; /**< Version number of the H5Z_class_t struct */ H5Z_filter_t id; /**< Filter ID number */ unsigned encoder_present; /**< Does this filter have an encoder? */ unsigned decoder_present; /**< Does this filter have a decoder? */ const char * name; /**< Comment for debugging */ H5Z_can_apply_func_t can_apply; /**< The "can apply" callback for a filter */ H5Z_set_local_func_t set_local; /**< The "set local" callback for a filter */ H5Z_func_t filter; /**< The actual filter function */ } H5Z_class2_t; //! /** * \ingroup H5Z * * \brief Registers a new filter with the HDF5 library * * \param[in] cls A pointer to a buffer for the struct containing the * filter-definition * * \return \herr_t * * \details H5Zregister() registers a new filter with the HDF5 library. * * \details Making a new filter available to an application is a two-step * process. The first step is to write the three filter callback * functions described below: \c can_apply, \c set_local, and \c * filter. This call to H5Zregister(), registering the filter with the * library, is the second step. The can_apply and set_local fields can * be set to NULL if they are not required for the filter being * registered. * * H5Zregister() accepts a single parameter, a pointer to a buffer for * the \p cls data structure. That data structure must conform to one * of the following definitions: * \snippet this H5Z_class1_t_snip * or * \snippet this H5Z_class2_t_snip * * \c version is a library-defined value reporting the version number * of the #H5Z_class_t struct. This currently must be set to * #H5Z_CLASS_T_VERS. * * \c id is the identifier for the new filter. This is a user-defined * value between #H5Z_FILTER_RESERVED and #H5Z_FILTER_MAX. These * values are defined in the HDF5 source file H5Zpublic.h, but the * symbols #H5Z_FILTER_RESERVED and #H5Z_FILTER_MAX should always be * used instead of the literal values. * * \c encoder_present is a library-defined value indicating whether * the filter’s encoding capability is available to the application. * * \c decoder_present is a library-defined value indicating whether * the filter’s encoding capability is available to the application. * * \c name is a descriptive comment used for debugging, may contain a * descriptive name for the filter, and may be the null pointer. * * \c can_apply, described in detail below, is a user-defined callback * function which determines whether the combination of the dataset * creation property list values, the datatype, and the dataspace * represent a valid combination to apply this filter to. * * \c set_local, described in detail below, is a user-defined callback * function which sets any parameters that are specific to this * dataset, based on the combination of the dataset creation property * list values, the datatype, and the dataspace. * * \c filter, described in detail below, is a user-defined callback * function which performs the action of the filter. * * The statistics associated with a filter are not reset by this * function; they accumulate over the life of the library. * * #H5Z_class_t is a macro which maps to either H5Z_class1_t or * H5Z_class2_t, depending on the needs of the application. To affect * only this macro, H5Z_class_t_vers may be defined to either 1 or 2. * Otherwise, it will behave in the same manner as other API * compatibility macros. See API Compatibility Macros in HDF5 for more * information. H5Z_class1_t matches the #H5Z_class_t structure that is * used in the 1.6.x versions of the HDF5 library. * * H5Zregister() will automatically detect which structure type has * been passed in, regardless of the mapping of the #H5Z_class_t macro. * However, the application must make sure that the fields are filled * in according to the correct structure definition if the macro is * used to declare the structure. * * \Bold{The callback functions:}\n Before H5Zregister() can link a * filter into an application, three callback functions must be * defined as described in the HDF5 library header file H5Zpublic.h. * * When a filter is applied to the fractal heap for a group (e.g., * when compressing group metadata) and if the can apply and set local * callback functions have been defined for that filter, HDF5 passes * the value -1 for all parameters for those callback functions. This * is done to ensure that the filter will not be applied to groups if * it relies on these parameters, as they are not applicable to group * fractal heaps; to operate on group fractal heaps, a filter must be * capable of operating on an opaque block of binary data. * * The \Emph{can apply} callback function must return a positive value * for a valid combination, zero for an invalid combination, and a * negative value for an error. * \snippet this H5Z_can_apply_func_t_snip * * Before a dataset is created, the \Emph{can apply} callbacks for any * filters used in the dataset creation property list are called with * the dataset's dataset creation property list, \c dcpl_id, the * dataset's datatype, \p type_id, and a dataspace describing a chunk, * \p space_id, (for chunked dataset storage). * * This callback must determine whether the combination of the dataset * creation property list settings, the datatype, and the dataspace * represent a valid combination to which to apply this filter. For * example, an invalid combination may involve the filter not * operating correctly on certain datatypes, on certain datatype * sizes, or on certain sizes of the chunk dataspace. If this filter * is enabled through H5Pset_filter() as optional and the can apply * function returns 0, the library will skip the filter in the filter * pipeline. * * This callback can be the NULL pointer, in which case the library * will assume that the filter can be applied to a dataset with any * combination of dataset creation property list values, datatypes, * and dataspaces. * * The \Emph{set local} callback function is defined as follows: * \snippet this H5Z_set_local_func_t_snip * * After the can apply callbacks are checked for a new dataset, the * \Emph{set local} callback functions for any filters used in the * dataset creation property list are called. These callbacks receive * \c dcpl_id, the dataset's private copy of the dataset creation * property list passed in to H5Dcreate() (i.e. not the actual * property list passed in to H5Dcreate()); \c type_id, the datatype * identifier passed in to H5Dcreate(), which is not copied and should * not be modified; and \c space_id, a dataspace describing the chunk * (for chunked dataset storage), which should also not be modified. * * The set local callback must set any filter parameters that are * specific to this dataset, based on the combination of the dataset * creation property list values, the datatype, and the dataspace. For * example, some filters perform different actions based on different * datatypes, datatype sizes, numbers of dimensions, or dataspace * sizes. * * The \Emph{set local} callback may be the NULL pointer, in which * case, the library will assume that there are no dataset-specific * settings for this filter. * * The \Emph{set local} callback function must return a non-negative * value on success and a negative value for an error. * * The \Emph{filter operation} callback function, defining the * filter's operation on the data, is defined as follows: * \snippet this H5Z_func_t_snip * * The parameters \c flags, \c cd_nelmts, and \c cd_values are the * same as for the function H5Pset_filter(). The one exception is that * an additional flag, #H5Z_FLAG_REVERSE, is set when the filter is * called as part of the input pipeline. * * The parameter \c buf points to the input buffer which has a size of * \c buf_size bytes, \c nbytes of which are valid data. * * The filter should perform the transformation in place if possible. * If the transformation cannot be done in place, then the filter * should allocate a new buffer with malloc() and assign it to \c buf, * assigning the allocated size of that buffer to \c buf_size. The old * buffer should be freed by calling free(). * * If successful, the \Emph{filter operation} callback function * returns the number of valid bytes of data contained in \c buf. In * the case of failure, the return value is 0 (zero) and all pointer * arguments are left unchanged. * * \version 1.8.6 Return type for the \Emph{can apply} callback function, * \ref H5Z_can_apply_func_t, changed to \ref htri_t. * \version 1.8.5 Semantics of the \Emph{can apply} and \Emph{set local} * callback functions changed to accommodate the use of filters * with group fractal heaps. * \version 1.8.3 #H5Z_class_t renamed to H5Z_class2_t, H5Z_class1_t structure * introduced for backwards compatibility with release 1.6.x, * and #H5Z_class_t macro introduced in this release. Function * modified to accept either structure type. * \version 1.8.0 The fields \c version, \c encoder_present, and * \c decoder_present were added to the #H5Z_class_t \c struct * in this release. * \version 1.6.0 This function was substantially revised in Release 1.6.0 with * a new #H5Z_class_t struct and new set local and can apply * callback functions. * */ H5_DLL herr_t H5Zregister(const void *cls); /** * \ingroup H5Z * * \brief Unregisters a filter. * * \param[in] id Identifier of the filter to be unregistered. * \return \herr_t * * \details H5Zunregister() unregisters the filter specified in \p id. * * \details This function first iterates through all opened datasets and * groups. If an open object that uses this filter is found, the * function will fail with a message indicating that an object using * the filter is still open. All open files are then flushed to make * sure that all cached data that may use this filter are written out. * * If the application is a parallel program, all processes that * participate in collective data write should call this function to * ensure that all data is flushed. * * After a call to H5Zunregister(), the filter specified in filter * will no longer be available to the application. * * \version 1.8.12 Function modified to check for open objects using the * filter. * \since 1.6.0 */ H5_DLL herr_t H5Zunregister(H5Z_filter_t id); /** * \ingroup H5Z * * \brief Determines whether a filter is available * * \param[in] id Filter identifier * \return \htri_t * * \details H5Zfilter_avail() determines whether the filter specified in \p id * is available to the application. * * \since 1.6.0 */ H5_DLL htri_t H5Zfilter_avail(H5Z_filter_t id); /** * \ingroup H5Z * * \brief Retrieves information about a filter * * \param[in] filter Filter identifier * \param[out] filter_config_flags A bit field encoding the returned filter * information * \return \herr_t * * \details H5Zget_filter_info() retrieves information about a filter. At * present, this means that the function retrieves a filter's * configuration flags, indicating whether the filter is configured to * decode data, to encode data, neither, or both. * * If \p filter_config_flags is not set to NULL prior to the function * call, the returned parameter contains a bit field specifying the * available filter configuration. The configuration flag values can * then be determined through a series of bitwise AND operations, as * described below. * * Valid filter configuration flags include the following: * * * * * *
#H5Z_FILTER_CONFIG_ENCODE_ENABLEDEncoding is enabled for this filter
#H5Z_FILTER_CONFIG_DECODE_ENABLEDDecoding is enabled for this filter
* * A bitwise AND of the returned \p filter_config_flags and a valid * filter configuration flag will reveal whether the related * configuration option is available. For example, if the value of * \code * H5Z_FILTER_CONFIG_ENCODE_ENABLED & filter_config_flags * \endcode * is true, i.e., greater than 0 (zero), the queried filter * is configured to encode data; if the value is \c FALSE, i.e., equal to * 0 (zero), the filter is not so configured. * * If a filter is not encode-enabled, the corresponding \c H5Pset_* * function will return an error if the filter is added to a dataset * creation property list (which is required if the filter is to be * used to encode that dataset). For example, if the * #H5Z_FILTER_CONFIG_ENCODE_ENABLED flag is not returned for the SZIP * filter, #H5Z_FILTER_SZIP, a call to H5Pset_szip() will fail. * * If a filter is not decode-enabled, the application will not be able * to read an existing file encoded with that filter. * * This function should be called, and the returned \p * filter_config_flags analyzed, before calling any other function, * such as H5Pset_szip() , that might require a particular filter * configuration. * * \since 1.6.3 */ H5_DLL herr_t H5Zget_filter_info(H5Z_filter_t filter, unsigned int *filter_config_flags); /* Symbols defined for compatibility with previous versions of the HDF5 API. * * Use of these symbols is deprecated. */ #ifndef H5_NO_DEPRECATED_SYMBOLS /** * The filter table maps filter identification numbers to structs that * contain a pointers to the filter function and timing statistics. */ //! typedef struct H5Z_class1_t { H5Z_filter_t id; /**< Filter ID number */ const char * name; /**< Comment for debugging */ H5Z_can_apply_func_t can_apply; /**< The "can apply" callback for a filter */ H5Z_set_local_func_t set_local; /**< The "set local" callback for a filter */ H5Z_func_t filter; /**< The actual filter function */ } H5Z_class1_t; //! #endif /* H5_NO_DEPRECATED_SYMBOLS */ #ifdef __cplusplus } #endif #endif