tf ddlZddlmZddlmZddlmZejejdejd  ejd d ejd  ejddde e ddejdde dejddddddZ y)N) merge_coolers)cli)parse_field_paramout_pathF)exists)typein_paths)nargsr z --chunksizez-cz7Size of the merge buffer in number of pixel table rows.gsAT)helpr default show_defaultz--fieldzSpecify the names of value columns to merge as ''. Repeat the `--field` option for each one. Use ',dtype=' to specify the dtype. Include ',agg=' to specify an aggregation function different from 'sum'.)rr multiplez--appendz-az_Pass this flag to append the output cooler to an existing file instead of overwriting the file.)is_flagrrc Zt|rl|Dcgc]}t|d}}t|\}}} } t|| D cic] \} } |  | |  } } } t|| D cic] \} } |  | |  } } } ndgdd} } }t||||| | |rdydycc}wcc} } wcc} } w)a Merge multiple coolers with identical axes. OUT_PATH : Output file path or URI. IN_PATHS : Input file paths or URIs of coolers to merge. **Notes** Data columns merged: pixels/bin1_id, pixels/bin2_id, pixels/ Data columns preserved: chroms/name, chroms/length bins/chrom, bins/start, bins/end Additional columns in the the input files are not transferred to the output. F)includes_colnumNcountaw)mergebufcolumnsdtypesaggmode)lenrzipr)rr chunksizefieldappendargfield_specifiersr_rrcoldtfs Z/var/www/html/software/conda/envs/higlass/lib/python3.12/site-packages/cooler/cli/merge.pymerger)sh 5zEJ >A c5 9  #&'7"8FC),Wf)=Pgc2#r'PP$'$5G&#qsAvGG!(y$ S!$ QGsB B! B!$ B'/B')clickreducerr_utilrcommandargumentPathoptionintstrr)r(r6s "$  5!9: ":5::U+CD  B I   L    ' ,E;8,r5