o Nrf@sddlZddlmZgdZddZddZd d Zd d Zeej j d dej ddfddZ eej j d dej ddfddZ eej j dddZ eej jdddZdS)N)cbbi)info chromsizeszoomsfetch_intervalsfetchstackupcsfdd}|S)Ncs j|_|SN)__doc__)targetoriginalQ/var/www/html/software/conda/envs/catlas/lib/python3.10/site-packages/bbi/_bbi.pywrapper szdocumented_by..wrapperr)rrrr r documented_bys rcC4t| }|jWdS1swYdS)a  Fetch the chromosome list of a bbi file. Returns an ordered dictionary of chromosome names mapped to their sizes in bp. Parameters ---------- inFile : str Path to BigWig or BigBed file. Returns ------- dict[str, int] N)ropenrinFilefrrrr $rcCr)a Fetch the zoom levels of a bbi file. Returns a list of "reduction levels", i.e. the number of bases per summary item, i.e. the bin size. Parameters ---------- inFile : str Path to BigWig or BigBed file. Returns ------- list[int] N)rrrrrrrr#rrcCr)z Returns a dict of information about the bbi file. Parameters ---------- inFile : str Path to BigWig or BigBed file. Returns ------- dict N)rrrrrrrr6s $rgmeanFc CFt|} | ||||||||WdS1swYdSr )rrr) rchromstartendbinsmissingoobsummaryexactrrrrrH $rc Crr )rrr ) rZchromsZstartsZendsrr r!r"r#rrrrr Xr$r TcC>t|}|||||WdS1swYdSr )rrr)rrrriteratorrrrrrh $rcCr%r )rrfetch_summaries)rrrrZzoomrrrrr(nr'r()T)r)numpynpr__all__rrrrZBBIFilernanr rr(rrrrs2